Protein Fractionation
Protein Fractionation Sections
Protein Fractionation IntroductionSample complexity reduction is an important first step to facilitating access to the low abundant proteins of interest for clinical research and diagnostics. The process for human serum and plasma frequently includes the depletion of highly abundant proteins such as albumin and IgG in combination with other fractionation technologies, such as ion exchange or affinity separation, prior to 2D gel or LC-MS/MS analyses. Pall currently offers several solutions for small-scale chromatographic protein fractionation (see Table 2.8). Options include chromatography resin for affinity capture, ion exchange separation, and mixed-mode capture resins. Pall also offers membrane chromatography solutions, i.e., Mustang® membranes. All chemistries are available for use in several forms including standard chromatography columns, disposable columns, spin filters, and multi-well filter plates. |
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Table 2.8
Protein Fractionation Quick Selection Guide| Media | Description | Formats Available | Separation Mechanism |
| Ion Exchange | |||
| Q Ceramic HyperD F | Resin | Bottled resin | Strong anionic exchanger; binds negatively charged target |
| Mustang Q | Membrane unit | Syringe column, multi-well filter plate |
Strong anionic exchanger; binds negatively charged target |
| S Ceramic HyperD F | Resin | Bottled resin | Strong cationic exchanger; binds positively charged target |
| Mustang S | Membrane unit | Syringe column, multi-well filter plate |
Strong cationic exchanger; binds positively charged target |
| DEAE Ceramic HyperD F | Resin | Bottled resin | Weak anion exhanger |
| CM Ceramic HyperD F | Resin | Bottled resin | Weak cationic exchanger |
| Affinity | |||
| Heparin | Resin | Bottled resin | Direct binding to targets with an affinity for Heparin |
| Lysine | Resin | Bottled resin | Direct binding to targets with an affinity for Lysine |
| IMAC | Resin | Bottled resin | Binds tagged proteins using an immobilized metal compound |
| Mixed Mode | |||
| MEP | Resin | Bottled resin | Uses several binding mechanisms including hydrophobic interactions |
| HA Ultrogel® | Resin | Bottled resin | Mixed mode |
| Size Exclusion | |||
| Ultrogel | Resin | Bottled resin | Separates targets by size |
Table 2.9
Available Separation Columns| Description | Column Volume | Available from Pall |
| Glass Chromatography Column | Varies | No |
| Disposable Chromatography Column | Varies | No |
| Spin Filter | < 1 mL | Yes |
| Deep Well Multi-Well Filter Plate | 96 x < 1 mL | Yes |
| Multi-Well Filter Plate | 96 x < 350 µL | Yes |
















